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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837740.1_cds_XP_016506740.1_19935
CDS Infomation

[gene=LOC107824478] [db_xref=GeneID:107824478] [protein=APO protein 1, chloroplastic-like isoform X2] [protein_id=XP_016506740.1] [location=join(4022..4100,4610..4674,5823..6187,6299..7130)] [gbkey=CDS]
Sequence

ATGCTTCAGAATTTTCCAGCTCTGACATATACTCCATGGCAGCCATCTCCAAATAATTCC
TGCTCCAAGTCTTTGCCATGTGCTTGTCCCAGCGTGGTTGTATATAAGAAGTCACGGCAA
GGGCCTTATTTGCCTACTCTAAAGTTTGATCGTAGATATCATGCTACTGGTCCAAGAAGA
CGAGTAACCATTTTTTGTACTGATAGGAGGCATCCCCAAGGTCGAAACTCTAAGAAACGT
GAAGCTGTGCAGCAGAATGTTGATCTTCCCCCAGTCCTGCCCAAGAAAAAGAAGAAGCCC
TATCCCATGCCTCTCAAGAAAATTCAGCAGGCTGCTAGGGCTGATAAGAAGTTGGCAGAA
ATGGGAATAGAAAAGAAGCTTGAACCCCCTAAAAATGGATTGCTTGTACCTGACCTAATT
CCGGTGGCTTATGAAGTATTGGATGCTTGGAAACTTTTGATTAAAGGACTTTCACAGCTT
CTCCACTATGTTCCTGTCCATGCTTGTAGTGAATGCTCACAAATCCATGTTGCTCAAAGT
GGTAACGACATTCAGGATTGCCTTGGCCCGACCAACAGTAGTCGCAGAAGCTTCCACTCA
TGGGTGAAGGGTTCAATTAATGATGTGCTAATTCCTATCGAGTCATACCATATGTATGAT
CCTTTTGGCACACGCATTAAGCATGAGACACGGTTCAATTACGACAGAATTCCGGCAGTT
GTAGAACTTTGCATCCAAGCTGGCGTGGATCTGCCGGGATATCCTTCACGGAGAAGGACT
AAACCCATCAGAATGATGGGAAAGAAAGTGATCGACATAGGTGGATTAGTTGAGGAGCCT
AGACCCTCTGTAAACTCGAGTTCGGTAATTATGGACCTTGACACCCATCGATCTTTTGAA
CGGTTTACTCCACCATTGGAGTCAGAGGTGCCACGTATTGCCCAGGAGACAATTGACGCA
TATGAGAAAGTGAAATGGGGGGTGACTAGGTTGATGAAGAAGTACACTGTCAAAGCTTGT
GGATACTGTTCAGAGGTCCATGTGGGGCCATGGGGTCACAATGCGAAGCTCTGTGGGGAA
TTTAAACACCAATGGAGGGACGGAAAACATGGCTGGCAAGATGCAACAGTGGATGAGGTA
TTTCCCCCAAACTATGTGTGGCATGTTCGAGATCCAAAAGGAACCCCTTTGAGGAGTGCA
CTAAAGAGGTTCTATGGGAAGGCTCCAGCTGTGGTTGAAGTTTGTATGCAGGCTGGTGCT
CAAATACCTCACAAGTATAAGCCTATGATGAGGCTAGACATTGTGCTCCCTGAGAGTGAA
GAGAGTCGCCTAGCCGTGTAA

Peptide Sequence

PEP ID

XP_016506740.1
PEP Infomation

PREDICTED: APO protein 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MLQNFPALTYTPWQPSPNNSCSKSLPCACPSVVVYKKSRQGPYLPTLKFDRRYHATGPRR
RVTIFCTDRRHPQGRNSKKREAVQQNVDLPPVLPKKKKKPYPMPLKKIQQAARADKKLAE
MGIEKKLEPPKNGLLVPDLIPVAYEVLDAWKLLIKGLSQLLHYVPVHACSECSQIHVAQS
GNDIQDCLGPTNSSRRSFHSWVKGSINDVLIPIESYHMYDPFGTRIKHETRFNYDRIPAV
VELCIQAGVDLPGYPSRRRTKPIRMMGKKVIDIGGLVEEPRPSVNSSSVIMDLDTHRSFE
RFTPPLESEVPRIAQETIDAYEKVKWGVTRLMKKYTVKACGYCSEVHVGPWGHNAKLCGE
FKHQWRDGKHGWQDATVDEVFPPNYVWHVRDPKGTPLRSALKRFYGKAPAVVEVCMQAGA
QIPHKYKPMMRLDIVLPESEESRLAV

Transcript Sequence

Gene sequence data has not been registered.